BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C08LP1|AL425504
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig520 1177 0.0
3x_Contig849 629 e-180
>3x_Contig520
Length = 1382
Score = 1177 bits (593), Expect = 0.0
Identities = 593/593 (100%)
Strand = Plus / Minus
Query: 1 gatccccggcactttcctcactctctgctttaaaccagcatcgttcgtggcaacaatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gatccccggcactttcctcactctctgctttaaaccagcatcgttcgtggcaacaatgta 534
Query: 61 acacttgtgctgcaacactctatgaacaatacagtcatccgcataagtacccttatgcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 acacttgtgctgcaacactctatgaacaatacagtcatccgcataagtacccttatgcga 474
Query: 121 acaacttagcctcttgattcgcggatcacgagctagcttcaacgctatacgatacttggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 acaacttagcctcttgattcgcggatcacgagctagcttcaacgctatacgatacttggg 414
Query: 181 acccaacttctctaattcagccatcacacagtctgttatcaatatgttacacttggccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acccaacttctctaattcagccatcacacagtctgttatcaatatgttacacttggccaa 354
Query: 241 aagacaatccatcatacctttcactatgtcaatcttcttttgaatagagaaattgatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aagacaatccatcatacctttcactatgtcaatcttcttttgaatagagaaattgatgaa 294
Query: 301 atttgtatcgatgagtacctgatatggaggcttgatagcttcattatattggaagaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atttgtatcgatgagtacctgatatggaggcttgatagcttcattatattggaagaacaa 234
Query: 361 tgcactggatacttgtggaatgtttttagtcaactcaggatcatctttcttaacctcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tgcactggatacttgtggaatgtttttagtcaactcaggatcatctttcttaacctcttt 174
Query: 421 tgcctggttcgatttgagtcttgaatccttctttgcattcaatgtccgcttcacaagcgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tgcctggttcgatttgagtcttgaatccttctttgcattcaatgtccgcttcacaagcgc 114
Query: 481 aaactttctggtcttcttagccttacccatgacacacactaatattactctccctaatac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 aaactttctggtcttcttagccttacccatgacacacactaatattactctccctaatac 54
Query: 541 cgatatcagaataatatctagcgaggtacggaagtatgtattcctgtttgcat 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 cgatatcagaataatatctagcgaggtacggaagtatgtattcctgtttgcat 1
>3x_Contig849
Length = 3479
Score = 629 bits (317), Expect = e-180
Identities = 331/335 (98%), Gaps = 1/335 (0%)
Strand = Plus / Plus
Query: 641 catattattaaaacgtgaaagaataatactaaaggttttttgaaaattttcagtgaagca 700
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 catattattaaaacgtgaaagaataatcttaaaggttttttgaaaattttcagtgaagca 60
Query: 701 ctgtgcatctgaccagcataagacaaaaagaaagggaaacacaatctgctacatcggatg 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtgcatctgaccagcataagacaaaaagaaagggaaacacaatctgctacatcggatg 120
Query: 761 gagtatggtggtatgagattagacaaggcaagtgagtwctgtttgatagttgctcgatgt 820
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 gagtatggtggtatgagattagacaaggcaagtgagtactgtttgatagttgctcgatgt 180
Query: 821 ttaccagatatatagaaacattggatctttctcagtttattaaagtagtttacttaaagt 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaccagatatatagaaacattggatctttctcagtttattaaagtagtttacttaaagt 240
Query: 881 atatatcgaacggattaggaaggaaaatcagttatacacatcacattctatcaacagggg 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atatatcgaacggattaggaaggaaaatcagttatacacatcacattctatcaacagggg 300
Query: 941 ttaga-ccaatagacgcataccgttatttaggact 974
||||| |||||||||||||||||||||||||||||
Sbjct: 301 ttagacccaatagacgcataccgttatttaggact 335
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8541
Number of Sequences: 1807
Number of extensions: 8541
Number of successful extensions: 587
Number of sequences better than 1.0e-20: 2
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)